Sakai 12 install guide (binary)

1.0 Sakai 12 pre-requisites


To begin with the following items must be installed (you may skip any you all ready have installed.
  1. Java 1.8
  2. Git
  3. Maven 3.0 or later
  4. Tomcat 8

Sakai 11.0 was QA tested with jre-1.8.0_77, maven-3.2.3, tomcat-8.0.32 


2.0 Get the binary archive


(warning) Binary limitations. Post-release patches are not always packaged as jars, so a binary install forces a relatively static implementation that cannot be as readily patched later.

The binary distribution of Sakai provides a shortcut for those that already have Tomcat in place and configured as needed (including the database setup and configuration) and it does so by providing a pre-built Sakai that can simply be dropped into place. All you need to do is unpack the binary archive at the root Tomcat directory and the appropriate *.wars, *.jars, etc., for the Sakai application will be deposited in the correct locations.

The latest Sakai binary archive is available at http://source.sakaiproject.org/release/.


3.0 Verify/Install Java 1.8 


Oracle's Sun Java SE 8, a.k.a Java 1.8, is the required version to use with the Sakai. Certain files, such as *.jsp and *.jws, require compilation so downloading and attempting to use only the run time environment (JRE 8.0) will not suffice.  

To confirm that Java is both installed on your system and is the correct version for Sakai, run java -version from the command line:

java -version

If Java is installed, basic version and build information will be displayed. Example output:

java version "1.8.0_111"
Java(TM) SE Runtime Environment (build 1.8.0_31-b13)
Java HotSpot(TM) 64-Bit Server VM (build 25.31-b07, mixed mode)


3.1 Set Java environment variables


Several environment variables and related properties must be set for Java. For UNIX operating systems one typically modifies a startup file like ~/.bash_login to set and export shell variables while Mac users typically set and export environment variables in .bash_profile. For Windows, go to Start -> Control Panel -> System -> Advanced -> Environment Variables and set JAVA_HOME via the GUI.

Set the JAVA_HOME environment variable to point to the base directory of your Java installation and add Java's /bin directory to the PATH environment variable.

(info) If the variable JRE_HOME is already set or if you want to use a particular JRE if you have more than one JRE installed on your machine then you'll want to set the JRE_HOME variable as well. JRE_HOME is what Apache Tomcat uses when it starts up, but it defaults to use JAVA_HOME if JRE_HOME is not set. In most cases, setting JAVA_HOME should cover both cases sufficiently.

Variable

Unix

Mac

Windows

JAVA_HOME

export JAVA_HOME=/usr/java/java-current

export JAVA_HOME=/Library/Java/Home

JAVA_HOME=C:\jdk1.8.0_31

PATH

export PATH=$PATH:$JAVA_HOME/bin

export PATH=$PATH:$JAVA_HOME/bin

;C:\jdk1.8.0_31\bin

(warning) Windows: append the string to the end of the Path system variable

Set JAVA_OPTS

The default Java virtual machine (JVM) settings are insufficient for an application of Sakai's size. As a result several JVM parameters must be increased for Sakai to run, while others may need to be adjusted for optimal performance.

(tick) We recommend that you define these settings in Tomcat's /bin directory in a file named setenv.sh (Unix/Mac) or setenv.bat (Windows). See the "Install Tomcat 8" section below for more details. 

Specify a Language and Locale (optional)

You can define the default language/locale when starting Sakai by setting the system properties -Duser.language and -Duser.region. For information on supported languages see the release notes or visit the i18N Work Group space.

-Duser.language=pt 
-Duser.region=PT

In the case your locale is not fully supported in Java (as it happens with Basque or Mongolian languages) you should read this information:
Endorsed I18n Project 

Specify an HTTP Proxy (optional)

In environments where local network policy or firewalls require use of an upstream HTTP proxy/cache, Sakai needs to be configured accordingly. Otherwise components or services which use HTTP requests, such as the BasicNewsService for RSS feeds in the News tool, cannot retrieve data from the target URLs. This can be fixed with the following JAVA_OPTS arguments:

-Dhttp.proxyHost=cache.some.domain 
-Dhttp.proxyPort=8080


4.0 Install Tomcat 8 


  • Apache Tomcat - http://tomcat.apache.org/
  • Note: Always do a fresh install of Tomcat
  • Note: For Sakai versions prior to 11.4 please use Tomcat 8.0.34 or earlier. Later versions of Tomcat may cause problems. example: SAK-31608 - Sakai has startup warnings on Tomcat 8.0.39+ CLOSED
  • Note: Windows users should ensure that there are no spaces in the complete tomcat path as this causes errors with JSF tools in Sakai
    GOOD: C:\opt\tomcat\, C:\sakaistuff\installs\tomcat\
    BAD: C:\program files\tomcat\, C:\opt\apache tomcat 8.0.43\
  1. Download Tomcat from http://tomcat.apache.org/

    • Windows users should get the zip file instead of installing a service
      It makes viewing the tomcat logs easier and it is easier to configure


  2. Extract to /opt (symlink the apache-tomcat-x.y.z directory to tomcat after extracting)
    • Example (assuming you have saved the file as /opt/apache-tomcat-8.0.x.tar.gz)

      cd /opt
      tar xzvf apache-tomcat-8.0.x.tar.gz
      ln -nsf apache-tomcat-8.0.x tomcat
    • Windows users should either rename the directory or, if comfortable, create a directory junction using an elevated cmd prompt:

      mklink /J C:\apache-tomcat-8.0.x C:\tomcat
  3. Modify conf/server.xml for international character support
    1. Add URIEncoding="UTF-8" to the Connector element
      • <Connector port="8080" URIEncoding="UTF-8" ...
  4. Set environment variable: CATALINA_HOME=/opt/tomcat
  5. Add $CATALINA_HOME/bin to PATH
  6. Setup the SETENV file in the tomcat/bin directory with JAVA_OPTS (from Install Java 1.8).

    Populate Database With Demo Data

    Instead of starting with an empty database you can add the flag -Dsakai.demo=true in addition to the others shown here. During your first Tomcat launch it will populate your database with test data (students, courses, etc). Once the data has been created remove this flag for subsequent Tomcat launches. Be advised that this flag will not trigger on a database with data already in it so you must make this choice during the initial setup. It should also be noted that without this flag one will not be able to create any course sites in Sakai unless Academic Term, Subject, Course, and Section data is manually added to the "cm_" tables in the database.

    Note: Because the test users are 'provided', they do not appear in the Users tool. To get started, log in as "instructor" with the password: "sakai". Then you can add various rosters, including mega sections.

    Alternatively test data can be populated by running "Create sites, users and content for testing." in jobscheduler. This generates many sites, but the class sizes are smaller which is less optimal for performance testing.

    We recommend using -Djava.util.Arrays.useLegacyMergeSort=true until this issue can be resolved -  SAK-31707 - Broken Equality Comparators in Gradebook RESOLVED


    1. Sakai 21 and prior:

      1. Mac/Linux: Create a file called setenv.sh with the following (alternately, you can put this into your .bashrc file so they're automatically executed):

        Tomcat 8 Mac/Linux
        export JAVA_OPTS="-server -d64 -Xms1g -Xmx2g -Djava.awt.headless=true -XX:+UseCompressedOops -XX:+UseConcMarkSweepGC -XX:+DisableExplicitGC"
        JAVA_OPTS="$JAVA_OPTS -Dhttp.agent=Sakai"
        JAVA_OPTS="$JAVA_OPTS -Dorg.apache.jasper.compiler.Parser.STRICT_QUOTE_ESCAPING=false"
        JAVA_OPTS="$JAVA_OPTS -Dsakai.security=$CATALINA_HOME/sakai/"
        JAVA_OPTS="$JAVA_OPTS -Duser.timezone=US/Eastern"
        JAVA_OPTS="$JAVA_OPTS -Dsakai.cookieName=SAKAI2SESSIONID"
        JAVA_OPTS="$JAVA_OPTS -Dcom.sun.management.jmxremote -Dcom.sun.management.jmxremote.port=8089 -Dcom.sun.management.jmxremote.local.only=false -Dcom.sun.management.jmxremote.authenticate=false -Dcom.sun.management.jmxremote.ssl=false"
      2. Windows(PC): Create a file called setenv.bat with the following:

        Tomcat 8 Windows
        set JAVA_OPTS=-server -Xmx1028m -XX:MaxMetaspaceSize=512m -Dorg.apache.jasper.compiler.Parser.STRICT_QUOTE_ESCAPING=false -Djava.awt.headless=true -Dcom.sun.management.jmxremote -Dhttp.agent=Sakai -Djava.util.Arrays.useLegacyMergeSort=true -Dfile.encoding=UTF8
    2. Sakai 22+ (I.e. on Java 11)

      1. Mac/Linux: Create setenv.sh with the following:

        # Append -Dsakai.demo=true as necessary
        # Specify -Dsakai.security to specify a location for security.properties
        # Some other configuration from the Sakai 21 and prior example may also be relevant
        export JAVA_OPTS="-server -Xmx1028m -Dorg.apache.jasper.compiler.Parser.STRICT_QUOTE_ESCAPING=false -Djava.awt.headless=true -Dcom.sun.management.jmxremote -Dhttp.agent=Sakai -Dsakai.component.shutdownonerror=true \
            --add-exports=java.base/jdk.internal.misc=ALL-UNNAMED \
            --add-exports=java.base/sun.nio.ch=ALL-UNNAMED \
            --add-exports=java.management/com.sun.jmx.mbeanserver=ALL-UNNAMED \
            --add-exports=jdk.internal.jvmstat/sun.jvmstat.monitor=ALL-UNNAMED \
            --add-exports=java.base/sun.reflect.generics.reflectiveObjects=ALL-UNNAMED \
            --add-opens jdk.management/com.sun.management.internal=ALL-UNNAMED \
            --illegal-access=permit"
      2. Windows: If you use Windows, please update this document with a suitable setenv.bat
    3. [OPTIONAL] Delete the default webapps from the webapps dir (Note: this may not be desirable - webapps/ROOT contains the favicon, etc.)

      rm -rf webapps/*
      
Improve startup speed

You can significantly improve Tomcat's startup speed by modifying conf/context.xml to scan for TLDs only in jars of interest.

For Sakai 21 and earlier: Add this JarScanFilter block to the <Context>

<JarScanner>
    <!-- This is to speedup startup so that tomcat doesn't scan as much -->
    <JarScanFilter defaultPluggabilityScan="false"
        defaultTldScan="false"
        tldScan="jsf-impl-*.jar,jsf-widgets-*.jar,myfaces-impl-*.jar,pluto-taglib-*.jar,sakai-sections-app-util-*.jar,spring-webmvc-*.jar,standard-*.jar,tomahawk*.jar"/>
</JarScanner>

 

For Sakai 22 and later: In Java 11, Java EE has moved to Jakarta EE which includes JSF. Add this JarScanFilter block to the <Context>

<JarScanner>
    <!-- This is to speedup startup so that tomcat doesn't scan as much -->
    <JarScanFilter defaultPluggabilityScan="false"
        defaultTldScan="false"
        tldScan="jsf*.jar,*faces*.jar,pluto-taglib-*.jar,sakai-sections-app-util-*.jar,spring-webmvc-*.jar,standard-*.jar,tomahawk*.jar"/>
</JarScanner>




5.0 Unpack the Sakai binary distribution


The Sakai binary archive is available at http://source.sakaiproject.org/release/.

Download the archive into $CATALINA_HOME and then unpack the archive. Then start up Tomcat by running the Tomcat start up script in $CATALINA_HOME/bin. Unix/Mac users should make sure that they have write permissions to the Tomcat servlet container files and directories before proceeding or start up permission errors may occur.

(warning) If you wish to configure a binary installation you'll need to manually create a /sakai folder in $CATALINA_HOME to hold your sakai.properties file.


5.1 Configure Sakai


The sakai.properties file is a central configuration file that is typically stored in a /sakai subdirectory relative to the Tomcat home directory ($CATALINA_HOME). It is a non-XML text file containing a series of key/value pairs that is read using the load method of java.util.properties. Settings in sakai.properties govern everything from setting your institution's name to configuring your database. All settings in sakai.properties are read on startup; any changes you make subsequently will only take effect when you restart web application server.

For a source installation the default default.sakai.properties file is located in the config module:

sakai-src/config/configuration/bundles/src/bundle/org/sakaiproject/config/bundle/default.sakai.properties

(warning) The bin package does not include a sakai.properties file. This is a deliberate exclusion; it eliminates the possibility of overwriting a local sakai.properties file if a bin package is opened over an existing Sakai installation.

If you need to override the default settings you must create your own sakai.properties file either from scratch or from a known working copy adding new key/value settings in order to customize your installation. We recommend that you review the default.sakai.properties file included in the source installation or in the appropriate maintenance branch.

The default location for your local sakai.properties file is $CATALINA_HOME/sakai. This folder is not created by Maven during the build and deployment process, so you will have to create it manually or via a script. You can also store Sakai's configuration files outside of your web application server's file hierarchy. For example, in a development environment you may find yourself frequently reinstalling Tomcat and unless you create a build script to automate the Tomcat installation and configuration process avoiding having to recreate $CATALINA_HOME/sakai and sakai.properties each time has its advantages.

To locate your properties file outside of your web application server environment modify the Java startup command or the JAVA_OPTS environment variable and set a system property named sakai.home. Make sure your external location is readable and writable by your web application server.

-Dsakai.home=/path/to/desired/sakai/home/


5.2 Configure Database


Sakai 11 database support details

Make sure to include a MySql connector jar in your CATALINA_HOME/lib. 

Create a Sakai database with a default character set of UTF-8. Create a user account to which you will assign all permissions.

Use any database name and username you wish and then update your sakai.properties file (or even better, create a local.properties file, which has precedence).

In the example below the database is named "sakaidatabase" and the user account is "sakaiuser".

Excerpt from sakai.properties

username@javax.sql.BaseDataSource=sakaiuser
password@javax.sql.BaseDataSource=sakaipassword

## MySQL settings
vendor@org.sakaiproject.db.api.SqlService=mysql
driverClassName@javax.sql.BaseDataSource=com.mysql.jdbc.Driver
hibernate.dialect=org.hibernate.dialect.MySQL5InnoDBDialect
url@javax.sql.BaseDataSource=jdbc:mysql://127.0.0.1:3306/sakaidatabase?useUnicode=true&characterEncoding=UTF-8
validationQuery@javax.sql.BaseDataSource=select 1 from DUAL
defaultTransactionIsolationString@javax.sql.BaseDataSource=TRANSACTION_READ_COMMITTED


mysql -u root -p
Enter password: 
Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 272
Server version: 5.1.46 MySQL Community Server (GPL)

Copyright (c) 2000, 2010, Oracle and/or its affiliates. All rights reserved.
This software comes with ABSOLUTELY NO WARRANTY. This is free software,
and you are welcome to modify and redistribute it under the GPL v2 license

Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
mysql> create database sakaidatabase default character set utf8;
Query OK, 1 row affected (0.00 sec)

mysql> grant all on sakaidatabase.* to sakaiuser@'localhost' identified by 'sakaipassword';
Query OK, 0 rows affected (0.00 sec

mysql> grant all on sakaidatabase.* to sakaiuser@'127.0.0.1' identified by 'sakaipassword';
Query OK, 0 rows affected (0.00 sec)

mysql> flush privileges;
Query OK, 0 rows affected (0.00 sec)

mysql> quit


6.0 Start/Stop Tomcat


Start/stop Tomcat from the terminal by running the appropriate startup/shutdown script located in $CATALINA_HOME/bin:

Unix/Mac

sh startup.sh
sh shutdown.sh

Windows

startup.bat
shutdown.bat